GenomeSpace at ISMB 2013 Berlin

GenomeSpace will be featured at a number of events at ISMB 2013 in Berlin, July 19 - 22:

  • BOSC 2013, July 19 and 20. Join the developers of GenomeSpace and many other bioinformatics tools at BOSC 2013 Bionformatics Open Source Conference SIG meeting. Interact with other developers and share ideas and code, as well as learning about some of the latest developments in the field of open source bioinformatics.
     
  • Technology Track presentation (schedule TBD). Hear about the new developments in GenomeSpace, including support for more cloud-based storage systems, new tools added to the GenomeSpace community, and new recipes for creating powerful integrative analyses using GenomeSpace-enabled tools.

GenomeSpace at BOSC-Broad Interoperability Hackathon

GenomeSpace will be one of the featured tools at the BOSC/Broad interoperability hackathon on Sunday and Monday, April 7 and 8 at the Broad Institute. It occurs just prior to Bio-IT World in Boston and is a warm up event for BOSC 2013 occurring July 19-20th in Berlin. The goal of the hackathon will be developing open source tools to help enhance bioinformatics interoperability. See http://www.broadinstitute.org/events/interoperability-hackathon-2013/home for more information as the event approaches.

GenomeSpace at the 9th annual Cytoscape Workshop

GenomeSpace will be presenting at the 9th annual Cytoscape workshop at the Gladstone Institute in San Francisco on December 14th during the "Cytoscape Plugin and App Expo" section on Friday afternoon.

GenomeSpace moved to GenePattern's production servers

We have transitioned the GenePattern instance used by GenomeSpace to the main GenePattern server at http://genepattern.broadinstitute.org/gp effective immediately.  Up to now GenomeSpace has been pointed to a test instance at http://gpami.broadinstitute.org:8080/gp/. We recommend that you save your data from the GenePattern Test server to GenomeSpace by logging in directly from this link.

On the public GenePattern server you will need to associate your GenomeSpace credentials to your public GenePattern account or create a new Genepattern account if you do not already have one on that server.

Data left on the GenePattern test server after this time will be subject to Genepattern's default retention policy (expiration after 10 calendar days) and will remain available for a short time at the test URL, though this will not be launchable from GenomeSpace.

GenomeSpace moving to Galaxy's production servers

We will be transitioning the Galaxy instance used by GenomeSpace to the main Galaxy server at main.g2.bx.psu.edu at noon on Wednesday October 24.  Up to now GenomeSpace has been pointed to their test instance at https://test.g2.bx.psu.edu/root. We recommend that you save your data from the Galaxy Test server to GenomeSpace before that time.

On the public Galaxy server you will need to associate your GenomeSpace credentials to your public Galaxy account or create a new Galaxy account if you do not already have one on that server.

Data left on the Galaxy test server after this time will be subject to Galaxy's default retention policy and will remain available for a short time at the test URL, though this will not be launchable from GenomeSpace.

GenomeSpace at FGED

GenomeSpace will be featured in a talk on "Integrative Genomics Tools" at the FGED 13 meeting in Toronto on Tuesday, October 23. Hear the update on new GenomeSpace functionality and tools: http://www.microarrays.ca/fged/

GenomeSpace at BioConference Live, 9/13

Hear about the latest developments in GenomeSpace at the online BioConference Live on Thursday, September 13 at 1 PM EST.

GenomeSpace at BOSC 2012

GenomeSpace will be featured in the talk "GenomeSpace: An environment for frictionless bioinformatics" at the Bioinformatics Open Source Conference in Long Beach, CA on Saturday, July 14 at 10:45 am. Please see the schedule for more information. Also see the GenomeSpace poster during the BOSC poster exhibit. More information on BOSC is at http://www.open-bio.org/wiki/BOSC.

GenomeSpace on OpenHelix

The folks at OpenHelix, a company that develops traning materials for bioinformatics tools, have posted a review and Video Tip of the Week on GenomeSpace.

GenomeSpace Press

GenomeSpace is in the news:

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